fixed all errors when generating patches

applyPatches.sh

@@ -15,6 +15,8 @@ applyPatch() {
     fi
 	echo "$basedir/$target"
     cd "$basedir/$target"
+	#git checkout -d origin
+	git checkout $branch
     echo "Resetting $target to $what..."
     git config commit.gpgSign false
     echo "  Applying patches to $target..."

reBuildPatches.sh

@@ -29,7 +29,7 @@ savePatches() {
     target=$2
     branch=$3
     cd "$basedir/$target"
-    git format-patch --no-stat -N -o "../${what}-Patches/" $branch
+    git format-patch --no-stat -N -o "../${what}-Patches/" origin/$branch
     cd "$basedir"
     git add -A "${what}-Patches"
     if [ "$clean" != "clean" ]; then